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Customizations are saved to the file specified by custom-file, as
calls to custom-set-variables and custom-set-faces.
When you save customizations, the current implementation removes the
calls to custom-set-variables and custom-set-faces, and
replaces them with code generated on the basis of the current
customization state in Emacs.
By default custom-file is your `.emacs' file (for GNU Emacs
and older XEmacs) and is `custom.el' in the same directory as
`init.el' (in XEmacs 21.4 and later). If you use another file, you
must explicitly load it yourself.
As of XEmacs 21.4.7, when custom-file is present, it is loaded
after `init.el'. This is likely to change in the future,
because (1) actions in `init.el' often would like to depend on
customizations for consistent appearance and (2) Custom is quite brutal
about enforcing its idea of the correct values at initialization.
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